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Overview and Walkthrough

  • What is CAJAL?
  • Computing Intracellular Distance Matrices
  • Computing GW Distances
  • Inferring Associations with Cell Morphology
  • Computing Average Cell Shapes

TUTORIALS

  • Tutorial 1: Predicting the Molecular Type of Neurons
  • Tutorial 2: Genetic Determinants of Neuronal Morphology
  • Tutorial 3: Computing Morphological Distances in Very Large Datasets
  • Tutorial 4: Integration and Analysis of Multimodal Data

API

  • Processing SWC Files
  • Sampling from SWC Files
  • Processing Obj Meshes
  • Sampling from Segmented Images
  • Running Gromov-Wasserstein
  • Second Lower Bound and Quantized Gromov-Wasserstein
  • Combined SLB and Quantized GW Nearest Neighbors Algorithm
  • Laplacian Score
  • Average Cell Shapes
  • Clustering
  • Ternary Plots
  • Weighted Nearest Neighbors
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© Copyright 2022, Pablo Cámara. Revision b6228d43.

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